1 code implementation • 24 May 2023 • Lorenzo Basile, Nikos Karantzas, Alberto D'Onofrio, Luca Bortolussi, Alex Rodriguez, Fabio Anselmi
Despite their impressive performance in classification, neural networks are known to be vulnerable to adversarial attacks.
1 code implementation • 4 May 2022 • Aldo Glielmo, Iuri Macocco, Diego Doimo, Matteo Carli, Claudio Zeni, Romina Wild, Maria d'Errico, Alex Rodriguez, Alessandro Laio
DADApy is a python software package for analysing and characterising high-dimensional data manifolds.
1 code implementation • 29 Nov 2018 • Giovanni Pinamonti, Fabian Paul, Frank Noé, Alex Rodriguez, Giovanni Bussi
We here use molecular dynamics simulations and Markov state models to characterize the kinetics of RNA fraying and its sequence and direction dependence.
Computational Physics Statistical Mechanics Biological Physics Chemical Physics Biomolecules
1 code implementation • 19 Mar 2018 • Elena Facco, Maria d'Errico, Alex Rodriguez, Alessandro Laio
Analyzing large volumes of high-dimensional data is an issue of fundamental importance in data science, molecular simulations and beyond.
2 code implementations • 28 Feb 2018 • Maria d'Errico, Elena Facco, Alessandro Laio, Alex Rodriguez
The approach is based on an unsupervised extension of Density Peak clustering and a non-parametric density estimator that measures the probability density in the manifold containing the data.