no code implementations • 30 Oct 2023 • Olivier Rukundo, Andrea Behanova, Riccardo de Feo, Seppo Ronkko, Joni Oja, Jussi Tohka
To overcome the challenge, due to such a presence, we developed a software tool for semi-automatic annotation and segmentation of adenoviruses and a software tool for automatic segmentation and detection of intact adenoviruses in TEM imaging systems.
1 code implementation • 13 Dec 2021 • Andrea Behanova, Ali Abdollahzadeh, Ilya Belevich, Eija Jokitalo, Alejandra Sierra, Jussi Tohka
In this work, we introduce a freely available Matlab-based gACSON software for visualization, segmentation, assessment, and morphology analysis of myelinated axons in 3D-EM volumes of brain tissue samples.