no code implementations • 13 Jan 2023 • Felipe Sanchez, Jason A. Galvis, Nicolas Cardenas, Cesar A. Corzo, Chris Jones, Gustavo Machado
Given the farm-to-farm proximity in high pig production areas, local transmission is an important pathway in the spread of PRRSV; however, there is limited understanding of the role local transmission plays in the dissemination of PRRSV, specifically, the distance at which there is increased risk for transmission from infected to susceptible farms.
no code implementations • 14 Dec 2022 • Jason A. Galvis, Gustavo Machado
A large number of between-farm contacts with a pathogen stability >0. 8 were present in the vehicle network even with 100% cleaning effectiveness.
1 code implementation • 13 Jan 2022 • Jason A. Galvis, Cesar A. Corzo, Joaquin M. Prada, Gustavo Machado
Here, we modeled nine modes of between-farm transmission pathways including farm-to-farm proximity (local transmission), contact network of pig farm movements between sites, four different contact networks of transportation vehicles (vehicles that transport pigs from farm-to-farm, pigs to markets, feed distribution and crew), the volume of animal by-products within feed diets (e. g. animal fat and meat and bone meal) to reproduce PEDV transmission dynamics.
no code implementations • 26 Nov 2021 • Mathieu Andraud, Pachka Hammami, Brandon H. Hayes, Jason A. Galvis, Timothée Vergne, Gustavo Machado, Nicolas Rose
Raw movement data were directly used to build a dynamic network on a realistic time-scale.
1 code implementation • 21 Jul 2021 • Nicolas C. Cardenas, Abagael L. Sykes, Francisco P. N. Lopes, Gustavo Machado
Our analysis showed that the swine network was more connected than cattle and small ruminants in the temporal network view.
no code implementations • 11 Jun 2021 • Abagael L. Sykes, Gustavo S. Silva, Derald J. Holtkamp, Broc W. Mauch, Onyekachukwu Osemeke, Daniel C. L. Linhares, Gustavo Machado
Using survey data on biosecurity practices, farm demographics, and previous outbreaks from 139 herds, a set of machine learning algorithms were trained to classify farms by porcine reproductive and respiratory syndrome virus status, depending on their biosecurity practices, to produce a predicted outbreak risk.