Search Results for author: Lovro Vrček

Found 3 papers, 2 papers with code

Learning to Untangle Genome Assembly with Graph Convolutional Networks

1 code implementation1 Jun 2022 Lovro Vrček, Xavier Bresson, Thomas Laurent, Martin Schmitz, Mile Šikić

In this work, we explore a different approach to the central part of the genome assembly task that consists of untangling a large assembly graph from which a genomic sequence needs to be reconstructed.

Genome Sequence Reconstruction Using Gated Graph Convolutional Network

no code implementations29 Sep 2021 Lovro Vrček, Robert Vaser, Thomas Laurent, Mile Sikic, Xavier Bresson

A quest to determine the human DNA sequence from telomere to telomere started three decades ago and was finally finished in 2021.

A step towards neural genome assembly

1 code implementation NeurIPS Workshop LMCA 2020 Lovro Vrček, Petar Veličković, Mile Šikić

De novo genome assembly focuses on finding connections between a vast amount of short sequences in order to reconstruct the original genome.

Graph Representation Learning

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