Search Results for author: Mathias Prokop

Found 6 papers, 2 papers with code

MRSegmentator: Robust Multi-Modality Segmentation of 40 Classes in MRI and CT Sequences

1 code implementation10 May 2024 Hartmut Häntze, Lina Xu, Felix J. Dorfner, Leonhard Donle, Daniel Truhn, Hugo Aerts, Mathias Prokop, Bram van Ginneken, Alessa Hering, Lisa C. Adams, Keno K. Bressem

Results: The model showcased high accuracy in segmenting well-defined organs, achieving Dice Similarity Coefficient (DSC) scores of 0. 97 for the right and left lungs, and 0. 95 for the heart.

Transfer learning from a sparsely annotated dataset of 3D medical images

1 code implementation8 Nov 2023 Gabriel Efrain Humpire-Mamani, Colin Jacobs, Mathias Prokop, Bram van Ginneken, Nikolas Lessmann

A base segmentation model (3D U-Net) was trained on a large and sparsely annotated dataset; its weights were used for transfer learning on four new down-stream segmentation tasks for which a fully annotated dataset was available.

Organ Segmentation Segmentation +1

Kidney abnormality segmentation in thorax-abdomen CT scans

no code implementations6 Sep 2023 Gabriel Efrain Humpire Mamani, Nikolas Lessmann, Ernst Th. Scholten, Mathias Prokop, Colin Jacobs, Bram van Ginneken

Our end-to-end segmentation method was trained on 215 contrast-enhanced thoracic-abdominal CT scans, with half of these scans containing one or more abnormalities.

Segmentation

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