Search Results for author: Peter Eckmann

Found 3 papers, 1 papers with code

Target-Free Compound Activity Prediction via Few-Shot Learning

no code implementations27 Nov 2023 Peter Eckmann, Jake Anderson, Michael K. Gilson, Rose Yu

Predicting the activities of compounds against protein-based or phenotypic assays using only a few known compounds and their activities is a common task in target-free drug discovery.

Activity Prediction Drug Discovery +1

LIMO: Latent Inceptionism for Targeted Molecule Generation

1 code implementation17 Jun 2022 Peter Eckmann, Kunyang Sun, Bo Zhao, Mudong Feng, Michael K. Gilson, Rose Yu

We corroborate these docking-based results with more accurate molecular dynamics-based calculations of absolute binding free energy and show that one of our generated drug-like compounds has a predicted $K_D$ (a measure of binding affinity) of $6 \cdot 10^{-14}$ M against the human estrogen receptor, well beyond the affinities of typical early-stage drug candidates and most FDA-approved drugs to their respective targets.

Drug Discovery Gaussian Processes +1

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