1 code implementation • 28 Jun 2023 • Stefan T Radev, Marvin Schmitt, Lukas Schumacher, Lasse Elsemüller, Valentin Pratz, Yannik Schälte, Ullrich Köthe, Paul-Christian Bürkner
Modern Bayesian inference involves a mixture of computational techniques for estimating, validating, and drawing conclusions from probabilistic models as part of principled workflows for data analysis.
1 code implementation • 2 May 2023 • Yannik Schälte, Fabian Fröhlich, Paul J. Jost, Jakob Vanhoefer, Dilan Pathirana, Paul Stapor, Polina Lakrisenko, Dantong Wang, Elba Raimúndez, Simon Merkt, Leonard Schmiester, Philipp Städter, Stephan Grein, Erika Dudkin, Domagoj Doresic, Daniel Weindl, Jan Hasenauer
Mechanistic models are important tools to describe and understand biological processes.
1 code implementation • 30 Apr 2023 • Emad Alamoudi, Felipe Reck, Nils Bundgaard, Frederik Graw, Lutz Brusch, Jan Hasenauer, Yannik Schälte
Evaluation of the strategy on different problems and numbers of parallel cores reveals speed-ups of typically 10-20% and up to 50% compared to the best established approach.
1 code implementation • 24 Mar 2022 • Yannik Schälte, Emmanuel Klinger, Emad Alamoudi, Jan Hasenauer
The Python package pyABC provides a framework for approximate Bayesian computation (ABC), a likelihood-free parameter inference method popular in many research areas.
2 code implementations • 16 Dec 2020 • Fabian Fröhlich, Daniel Weindl, Yannik Schälte, Dilan Pathirana, Łukasz Paszkowski, Glenn Terje Lines, Paul Stapor, Jan Hasenauer
Ordinary differential equation models facilitate the understanding of cellular signal transduction and other biological processes.
Uncertainty Quantification Vocal Bursts Intensity Prediction
no code implementations • 7 Dec 2020 • Simon Syga, Diana David-Rus, Yannik Schälte, Michael Meyer-Hermann, Haralampos Hatzikirou, Andreas Deutsch
Countries around the world implement nonpharmaceutical interventions (NPIs) to mitigate the spread of COVID-19.