Search Results for author: YuDong Yao

Found 29 papers, 10 papers with code

Self-supervised Noise2noise Method Utilizing Corrupted Images with a Modular Network for LDCT Denoising

1 code implementation13 Aug 2023 Yuting Zhu, Qiang He, YuDong Yao, Yueyang Teng

Note that we use LDCT images based on the noisy-as-clean strategy for corruption instead of NDCT images.

Image Denoising

Quadratic Graph Attention Network (Q-GAT) for Robust Construction of Gene Regulatory Networks

1 code implementation24 Mar 2023 HUI ZHANG, Xuexin An, Qiang He, YuDong Yao, Yudong Zhang, Feng-Lei Fan, Yueyang Teng

The former informs that nonlinear aggregation of quadratic neurons can amplify useful signals and suppress unwanted noise, thereby facilitating robustness, while the latter reveals that Q-GAT can leverage more features in prediction thanks to the dual attention mechanism, which endows Q-GAT with the ability to confront adversarial perturbation.

Graph Attention

3D PETCT Tumor Lesion Segmentation via GCN Refinement

no code implementations24 Feb 2023 Hengzhi Xue, Qingqing Fang, YuDong Yao, Yueyang Teng

Secondly, the nnUNet result of the certainty nodes is used as label to form a semi-supervised graph network problem, and the uncertainty part is optimized through training the GCN network to improve the segmentation performance.

Lesion Segmentation Segmentation +1

Attentional Ptycho-Tomography (APT) for three-dimensional nanoscale X-ray imaging with minimal data acquisition and computation time

1 code implementation29 Nov 2022 Iksung Kang, Ziling Wu, Yi Jiang, YuDong Yao, Junjing Deng, Jeffrey Klug, Stefan Vogt, George Barbastathis

Noninvasive X-ray imaging of nanoscale three-dimensional objects, e. g. integrated circuits (ICs), generally requires two types of scanning: ptychographic, which is translational and returns estimates of complex electromagnetic field through ICs; and tomographic scanning, which collects complex field projections from multiple angles.

Deep learning at the edge enables real-time streaming ptychographic imaging

no code implementations20 Sep 2022 Anakha V Babu, Tao Zhou, Saugat Kandel, Tekin Bicer, Zhengchun Liu, William Judge, Daniel J. Ching, Yi Jiang, Sinisa Veseli, Steven Henke, Ryan Chard, YuDong Yao, Ekaterina Sirazitdinova, Geetika Gupta, Martin V. Holt, Ian T. Foster, Antonino Miceli, Mathew J. Cherukara

Coherent microscopy techniques provide an unparalleled multi-scale view of materials across scientific and technological fields, from structural materials to quantum devices, from integrated circuits to biological cells.

Quasi-supervised Learning for Super-resolution PET

1 code implementation3 Sep 2022 Guangtong Yang, Chen Li, YuDong Yao, Ge Wang, Yueyang Teng

In this paper, we propose a quasi-supervised learning method, which is a new type of weakly-supervised learning methods, to recover HR PET images from LR counterparts by leveraging similarity between unpaired LR and HR image patches.

Generative Adversarial Network Super-Resolution +1

Adaptive Weighted Nonnegative Matrix Factorization for Robust Feature Representation

1 code implementation7 Jun 2022 Tingting Shen, Junhang Li, Can Tong, Qiang He, Chen Li, YuDong Yao, Yueyang Teng

Nonnegative matrix factorization (NMF) has been widely used to dimensionality reduction in machine learning.

Dimensionality Reduction

Brachial Plexus Nerve Trunk Segmentation Using Deep Learning: A Comparative Study with Doctors' Manual Segmentation

no code implementations17 May 2022 Yu Wang, Binbin Zhu, Lingsi Kong, Jianlin Wang, Bin Gao, Jianhua Wang, Dingcheng Tian, YuDong Yao

With the help of deep learning methods, the automatic identification or segmentation of nerves can be realized, assisting doctors in completing nerve block anesthesia accurately and efficiently.

Segmentation

Subspace Nonnegative Matrix Factorization for Feature Representation

1 code implementation18 Apr 2022 Junhang Li, Jiao Wei, Can Tong, Tingting Shen, Yuchen Liu, Chen Li, Shouliang Qi, YuDong Yao, Yueyang Teng

Traditional nonnegative matrix factorization (NMF) learns a new feature representation on the whole data space, which means treating all features equally.

Improving the Level of Autism Discrimination through GraphRNN Link Prediction

no code implementations19 Feb 2022 Haonan Sun, Qiang He, Shouliang Qi, YuDong Yao, Yueyang Teng

This paper is based on the latter technique, which learns the edge distribution of real brain network through GraphRNN, and generates the synthetic data which has incentive effect on the discriminant model.

feature selection Link Prediction

A Comprehensive Survey with Quantitative Comparison of Image Analysis Methods for Microorganism Biovolume Measurements

no code implementations18 Feb 2022 Jiawei Zhang, Chen Li, Md Mamunur Rahaman, YuDong Yao, Pingli Ma, Jinghua Zhang, Xin Zhao, Tao Jiang, Marcin Grzegorzek

This study has high research significance and application value, which can be referred to microbial researchers to have a comprehensive understanding of microorganism biovolume measurements using digital image analysis methods and potential applications.

Image Segmentation Semantic Segmentation

Real-time X-ray Phase-contrast Imaging Using SPINNet -- A Speckle-based Phase-contrast Imaging Neural Network

no code implementations18 Jan 2022 Zhi Qiao, Xianbo Shi, YuDong Yao, Michael J. Wojcik, Luca Rebuffi, Mathew J. Cherukara, Lahsen Assoufid

In addition to significant improvement in speed, our experimental results show that the imaging resolution and phase retrieval quality of SPINNet outperform existing single-shot speckle-based methods.

Retrieval

An Entropy Weighted Nonnegative Matrix Factorization Algorithm for Feature Representation

1 code implementation27 Nov 2021 Jiao Wei, Can Tong, Bingxue Wu, Qiang He, Shouliang Qi, YuDong Yao, Yueyang Teng

Nonnegative matrix factorization (NMF) has been widely used to learn low-dimensional representations of data.

Attribute

AutoPhaseNN: Unsupervised Physics-aware Deep Learning of 3D Nanoscale Bragg Coherent Diffraction Imaging

1 code implementation28 Sep 2021 YuDong Yao, Henry Chan, Subramanian Sankaranarayanan, Prasanna Balaprakash, Ross J. Harder, Mathew J. Cherukara

The problem of phase retrieval, or the algorithmic recovery of lost phase information from measured intensity alone, underlies various imaging methods from astronomy to nanoscale imaging.

Astronomy Retrieval

GasHisSDB: A New Gastric Histopathology Image Dataset for Computer Aided Diagnosis of Gastric Cancer

1 code implementation4 Jun 2021 Weiming Hu, Chen Li, Xiaoyan Li, Md Mamunur Rahaman, Jiquan Ma, Yong Zhang, HaoYuan Chen, Wanli Liu, Changhao Sun, YuDong Yao, Hongzan Sun, Marcin Grzegorzek

In order to prove that the methods of different periods in the field of image classification have discrepancies on GasHisSDB, we select a variety of classifiers for evaluation.

BIG-bench Machine Learning Image Classification +1

A State-of-the-art Survey of Object Detection Techniques in Microorganism Image Analysis: From Classical Methods to Deep Learning Approaches

no code implementations7 May 2021 Pingli Ma, Chen Li, Md Mamunur Rahaman, YuDong Yao, Jiawei Zhang, Shuojia Zou, Xin Zhao, Marcin Grzegorzek

In this review, first, we analyse the existing microorganism detection methods in chronological order, from traditional image processing and traditional machine learning to deep learning methods.

object-detection Object Detection

DeepCervix: A Deep Learning-based Framework for the Classification of Cervical Cells Using Hybrid Deep Feature Fusion Techniques

no code implementations24 Feb 2021 Md Mamunur Rahaman, Chen Li, YuDong Yao, Frank Kulwa, Xiangchen Wu, Xiaoyan Li, Qian Wang

Pap smear test is a widely performed screening technique for early detection of cervical cancer, whereas this manual screening method suffers from high false-positive results because of human errors.

Cell Segmentation Classification +1

Review of Machine-Learning Methods for RNA Secondary Structure Prediction

no code implementations1 Sep 2020 Qi Zhao, Zheng Zhao, Xiaoya Fan, Zhengwei Yuan, Qian Mao, YuDong Yao

Recently, with the increasing availability of RNA structure data, new methods based on machine-learning technologies, especially deep learning, have alleviated the issue.

BIG-bench Machine Learning

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